Changeset 955 for cpp/frams/genetics/genman.cpp

Timestamp:

06/25/20 00:34:29 (4 years ago)

Author:

Maciej Komosinski

Message:

Genetic format ID becomes a string (no longer limited to a single character)

File:

• cpp/frams/genetics/genman.cpp (modified) (25 diffs)

cpp/frams/genetics/genman.cpp

@@ -1 +1 @@
 // This file is a part of Framsticks SDK.  http://www.framsticks.com/
-// Copyright (C) 1999-2018  Maciej Komosinski and Szymon Ulatowski.
+// Copyright (C) 1999-2020  Maciej Komosinski and Szymon Ulatowski.
 // See LICENSE.txt for details.
 
@@ -68 +68 @@
 #ifdef USE_GENMAN_fL
 #include "fL/fL_oper.h"
+#endif
+#ifdef USE_GENMAN_fS
+#include "fS/fS_oper.h"
 #endif
 
@@ -177 +180 @@
         oper_fx_list.push_back(new Geno_fL);
 #endif
+#ifdef USE_GENMAN_fS
+        oper_fx_list.push_back(new GenoOper_fS);
+#endif
 
         seloper = new int[oper_fx_list.size()]; //may result in a little overhead if some of the operators on the oper_fx_list concern the same genetic format
@@ -182 +188 @@
         for (unsigned int i = 0; i < oper_fx_list.size(); i++)
         {
-                if (operformats.find(oper_fx_list[i]->supported_format) != -1) continue;
+                if (findOperFormatIndex(oper_fx_list[i]->supported_format) != -1) continue;
                 string type = string("~") + oper_fx_list[i]->name;
                 int dup = 0;
@@ -188 +194 @@
                         if (oper_fx_list[i]->supported_format == oper_fx_list[j]->supported_format)
                         {
-                        type += "~";
-                        type += oper_fx_list[j]->name;
-                        dup++;
+                                type += "~";
+                                type += oper_fx_list[j]->name;
+                                dup++;
                         }
                 type = ssprintf("d 0 %d ", dup) + type;
-                string id = ssprintf("genoper_f%c", oper_fx_list[i]->supported_format);
-                string name = ssprintf("Operators for f%c", oper_fx_list[i]->supported_format);
+                string id = ssprintf("genoper_f%s", oper_fx_list[i]->supported_format.c_str());
+                string name = ssprintf("Operators for f%s", oper_fx_list[i]->supported_format.c_str());
                 seloper[selopercount] = 0;
-                operformats += oper_fx_list[i]->supported_format;
+                operformats += &oper_fx_list[i]->supported_format;
                 //printf("%x %s %s %s\n",&seloper[selopercount],(const char*)id,(const char*)type,(const char*)name);
-                seloperpar.addProperty(&seloper[selopercount++], id.c_str(), type.c_str(), name.c_str(), "", PARAM_READONLY*(dup == 0));
+                seloperpar.addProperty(&seloper[selopercount++], id.c_str(), type.c_str(), name.c_str(), "", PARAM_READONLY * (dup == 0));
         }
 
@@ -214 +220 @@
         for (unsigned int i = 0; i < oper_fx_list.size(); i++) delete oper_fx_list[i];
         delete[] seloper;
+}
+
+int GenMan::findOperFormatIndex(const SString& format)
+{
+        for (int i = 0; i < operformats.size(); i++)
+                if (*operformats(i) == format)
+                        return i;
+        return -1;
 }
 
@@ -265 +279 @@
 Geno GenMan::validate(const Geno& geny)
 {
-        char format = geny.getFormat();
+        SString format = geny.getFormat();
         GenoOperators *gf = getOper_f(format);
         if (gf == NULL)
-                return Geno(SString::empty(), -1, SString::empty(), SString::sprintf("GENOPER_NOOPER: Validate(): don't know how to handle genetic format %c", format));
+                return Geno("", Geno::INVALID_FORMAT, "", SString::sprintf("GENOPER_NOOPER: Validate(): don't know how to handle genetic format %s", format.c_str()));
         char *g2 = strdup(geny.getGenes().c_str()); //copy for validation
         int res = gf->validate(g2, geny.getName().c_str());
@@ -276 +290 @@
                 return Geno(sg2, format, geny.getName(), geny.getComment());
         else
-                return Geno(SString::empty(), -1, SString::empty(), SString::sprintf("GENOPER_NOOPER: validate() for format %c returned invalid value", format));
+                return Geno("", Geno::INVALID_FORMAT, "", SString::sprintf("GENOPER_NOOPER: validate() for format %s returned invalid value", format.c_str()));
 }
 
@@ -283 +297 @@
         float chg; //how many changes
         int method; //mutation method
-        char format = g.getFormat();
+        SString format = g.getFormat();
         GenoOperators *gf = getOper_f(format);
         if (gf == NULL)
-                return Geno(SString::empty(), -1, SString::empty(), SString::sprintf("GENOPER_NOOPER: Mutate(): don't know how to handle genetic format %c", format));
+                return Geno("", Geno::INVALID_FORMAT, "", SString::sprintf("GENOPER_NOOPER: Mutate(): don't know how to handle genetic format %s", format.c_str()));
         Geno gv = g;
         bool canvalidate = true;
         if (testValidity(gv, canvalidate) > 0 && canvalidate == false)
-                return Geno("", -1, "", "GENOPER_OPFAIL: Mutate(): cannot validate invalid source genotype");
+                return Geno("", Geno::INVALID_FORMAT, "", "GENOPER_OPFAIL: Mutate(): cannot validate invalid source genotype");
         bool ok = false;
         int pcount = count;
@@ -307 +321 @@
                                 if (res > 0 && canvalidate == false) invalid_m++; else
                                 {
-                                validated_m++; ok = true;
+                                        validated_m++; ok = true;
                                 }
                         if (ok) gv = G;
@@ -316 +330 @@
                 if (!ok && (count - pcount > GENMAN_REPEAT_FAILED))
                 {
-                        logPrintf("GenMan", "Mutate", 2, "Tried " GENMAN_REPEAT_FAILED_STR "x and failed: %s", g.getGenes().c_str());
+                        logPrintf("GenMan", "Mutate", LOG_WARN, "Tried " GENMAN_REPEAT_FAILED_STR "x and failed: %s", g.getGenes().c_str());
                         return Geno("", -1, "", "GENOPER_OPFAIL: Mutate() tried " GENMAN_REPEAT_FAILED_STR "x and failed");
                 }
@@ -332 +346 @@
 Geno GenMan::crossOver(const Geno& g1, const Geno& g2)
 {
-        char format = g1.getFormat();
-        if (format != g2.getFormat()) return Geno(SString::empty(), -1, SString::empty(), SString::sprintf("GENOPER_NOOPER: CrossOver(): does not work for parents with differing genetic formats (%c and %c)", format, g2.getFormat()));
+        SString format = g1.getFormat();
+        if (format != g2.getFormat()) return Geno("", Geno::INVALID_FORMAT, "", SString::sprintf("GENOPER_NOOPER: CrossOver(): does not work for parents with differing genetic formats (%s and %s)", format.c_str(), g2.getFormat().c_str()));
         GenoOperators *gf = getOper_f(format);
         if (gf == NULL)
-                return Geno(SString::empty(), -1, SString::empty(), SString::sprintf("GENOPER_NOOPER: CrossOver(): no operators found for genetic format %c", format));
+                return Geno("", Geno::INVALID_FORMAT, "", SString::sprintf("GENOPER_NOOPER: CrossOver(): no operators found for genetic format %s", format.c_str()));
         Geno g1v = g1, g2v = g2;
 
@@ -343 +357 @@
                 bool canvalidate = true;
                 if (testValidity(g1v, canvalidate) > 0 && canvalidate == false)
-                        return Geno("", -1, "", "GENOPER_OPFAIL: CrossOver(): cannot validate invalid source genotype #1");
+                        return Geno("", Geno::INVALID_FORMAT, "", "GENOPER_OPFAIL: CrossOver(): cannot validate invalid source genotype #1");
                 canvalidate = true;
                 if (testValidity(g2v, canvalidate) > 0 && canvalidate == false)
-                        return Geno("", -1, "", "GENOPER_OPFAIL: CrossOver(): cannot validate invalid source genotype #2");
+                        return Geno("", Geno::INVALID_FORMAT, "", "GENOPER_OPFAIL: CrossOver(): cannot validate invalid source genotype #2");
         }
 
@@ -373 +387 @@
                                 if (res > 0 && canvalidate == false) invalid_xo++; else
                                 {
-                                validated_xo++; ok = true;
+                                        validated_xo++; ok = true;
                                 }
                         if (ok) g1v = G;
@@ -383 +397 @@
                 if (!ok && (count - pcount > GENMAN_REPEAT_FAILED))
                 {
-                        logPrintf("GenMan", "CrossOver", 2, "Tried " GENMAN_REPEAT_FAILED_STR "x and failed: %s and %s", g1.getGenes().c_str(), g2.getGenes().c_str());
-                        return Geno("", -1, "", "GENOPER_OPFAIL: CrossOver() tried " GENMAN_REPEAT_FAILED_STR "x and failed");
+                        logPrintf("GenMan", "CrossOver", LOG_WARN, "Tried " GENMAN_REPEAT_FAILED_STR "x and failed: %s and %s", g1.getGenes().c_str(), g2.getGenes().c_str());
+                        return Geno("", Geno::INVALID_FORMAT, "", "GENOPER_OPFAIL: CrossOver() tried " GENMAN_REPEAT_FAILED_STR "x and failed");
                 }
         }
@@ -398 +412 @@
 float GenMan::similarity(const Geno& g1, const Geno& g2)
 {
-        char format = g1.getFormat();
+        SString format = g1.getFormat();
         if (format != g2.getFormat()) return GENOPER_NOOPER;
         GenoOperators *gf = getOper_f(format);
@@ -406 +420 @@
 uint32_t GenMan::getStyle(const char *g, const Geno *G, int pos)
 {
-        char format = G->getFormat();
+        SString format = G->getFormat();
         if (format == Geno::INVALID_FORMAT)
                 return GENSTYLE_RGBS(64, 64, 64, 0); // gray & "valid" (unknown format so we don't know what is valid and what is not)
@@ -423 +437 @@
 void GenMan::getFullStyle(const char *g, const Geno *G, uint32_t *styletab)
 {
-        char format = G->getFormat();
+        SString format = G->getFormat();
         if (format == Geno::INVALID_FORMAT)
         {
@@ -438 +452 @@
                 else if (!gf) styletab[pos] = GENSTYLE_CS(0, 0); //black & valid
                 else styletab[pos] = gf->style(geny.c_str(), posmapped);
-                //logPrintf("GenMan", "getFullStyle", 0, "%d  char='%c' (%d)  format=0x%08x", pos, g[pos], g[pos], styletab[pos]);
+                //logPrintf("GenMan", "getFullStyle", LOG_INFO, "%d  char='%c' (%d)  format=0x%08x", pos, g[pos], g[pos], styletab[pos]);
         }
 }
@@ -473 +487 @@
                 color = GENGETCOLOR(styletab[i]);
                 if ((i != 0 && (color != prevcolor))) html += "</font>";
-                if ((style&GENSTYLE_INVALID) != (prevstyle&GENSTYLE_INVALID))
-                {
-                        html += "<"; if (!(style&GENSTYLE_INVALID)) html += "/"; html += "u>";
-                }
-                if ((style&GENSTYLE_BOLD) != (prevstyle&GENSTYLE_BOLD))
-                {
-                        html += "<"; if (!(style&GENSTYLE_BOLD)) html += "/"; html += "b>";
-                }
-                if ((style&GENSTYLE_ITALIC) != (prevstyle&GENSTYLE_ITALIC))
-                {
-                        html += "<"; if (!(style&GENSTYLE_ITALIC)) html += "/"; html += "i>";
+                if ((style & GENSTYLE_INVALID) != (prevstyle & GENSTYLE_INVALID))
+                {
+                        html += "<"; if (!(style & GENSTYLE_INVALID)) html += "/"; html += "u>";
+                }
+                if ((style & GENSTYLE_BOLD) != (prevstyle & GENSTYLE_BOLD))
+                {
+                        html += "<"; if (!(style & GENSTYLE_BOLD)) html += "/"; html += "b>";
+                }
+                if ((style & GENSTYLE_ITALIC) != (prevstyle & GENSTYLE_ITALIC))
+                {
+                        html += "<"; if (!(style & GENSTYLE_ITALIC)) html += "/"; html += "i>";
                 }
                 if ((i == 0 || (color != prevcolor)))
@@ -509 +523 @@
 }
 
-Geno GenMan::getSimplest(char format)
+Geno GenMan::getSimplest(const SString& format)
 {
         GenoOperators *gf = getOper_f(format);
         if (!gf) return Geno();
-        string info = "The simplest genotype of format f"; info += format;
+        string info = "The simplest genotype of format f"; info += format.c_str();
         info += " for operators '"; info += gf->name; info += "'.";
         return Geno(gf->getSimplest(), format, "Root", info.c_str());
@@ -520 +534 @@
 void GenMan::p_getsimplest(ExtValue *args, ExtValue *ret)
 {
-        int format = GenoObj::formatFromExtValue(args[0]);
+        SString format = GenoObj::formatFromExtValue(args[0]);
         if (!getOper_f(format))
                 ret->setEmpty();
@@ -527 +541 @@
 }
 
-const char *GenMan::getOpName(char format)
+const char *GenMan::getOpName(const SString& format)
 {
         GenoOperators *gf = getOper_f(format);
@@ -533 +547 @@
 }
 
-GenoOperators* GenMan::getOper_f(char format)
-{
-        int ind = operformats.find(format);
+GenoOperators* GenMan::getOper_f(const SString& format)
+{
+        int ind = findOperFormatIndex(format);
         if (ind == -1) return NULL;
         int which_oper_of_format = seloper[ind];
@@ -602 +616 @@
                 }
                 //      if (oper_fx_list[i]->similarity("","")!=GENOPER_NOOPER) l+=" similarity";
-                logPrintf("GenMan", "Report", 0, "format f%c (%s):%s",
-                        oper_fx_list[i]->supported_format, oper_fx_list[i]->name.c_str(), l.c_str());
+                logPrintf("GenMan", "Report", LOG_INFO, "format f%s (%s):%s",
+                        oper_fx_list[i]->supported_format.c_str(), oper_fx_list[i]->name.c_str(), l.c_str());
         }
 }