Changeset 614 for mds-and-trees


Ignore:
Timestamp:
09/11/16 22:45:46 (4 years ago)
Author:
Maciej Komosinski
Message:

Fixed typos

File:
1 edited

Legend:

Unmodified
Added
Removed
  • mds-and-trees/tree-genealogy.py

    r594 r614  
    422422        svg_mutation_line_style, svg_crossover_line_style
    423423
    424     parser = argparse.ArgumentParser(description='Process some integers.')
     424    parser = argparse.ArgumentParser(description='Draws a genealogical tree (generates a SVG file) based on parent-child relationship information from a text file. Supports with files generated by Framsticks experiments.')
    425425    parser.add_argument('-i', '--in', dest='input', required=True, help='input file with stuctured evolutionary data')
    426426    parser.add_argument('-o', '--out', dest='output', required=True, help='output file for the evolutionary tree')
     
    439439    #TODO: better names for those parameters
    440440    parser.add_argument('-t', '--time', default='GENERATIONAL', dest='time', help='values on vertical axis (BIRTHS/GENERATIONAL/REAL); '
    441                                                                       'BIRTHS: time measured as the number of births since the beggining; '
     441                                                                      'BIRTHS: time measured as the number of births since the beginning; '
    442442                                                                      'GENERATIONAL: time measured as number of ancestors; '
    443443                                                                      'REAL: real time of the simulation')
    444     parser.add_argument('-b', '--balance', default='DENSITY', dest='balance', help='method of placing node in the tree (RANDOM/MIN/DENSITY)')
     444    parser.add_argument('-b', '--balance', default='DENSITY', dest='balance', help='method of placing nodes in the tree (RANDOM/MIN/DENSITY)')
    445445    parser.add_argument('-s', '--scale', default='NONE', dest='scale', help='type of timescale added to the tree (NONE/SIMPLE)')
    446446    parser.add_argument('-c', '--coloring', default='IMPORTANCE', dest="coloring", help='method of coloring the tree (NONE/IMPORTANCE/TYPE)')
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