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@767
|
6 years |
Maciej Komosinski |
More strict parsing of the repetition counter; bug fixes; improved …
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@766
|
6 years |
Maciej Komosinski |
Added a number of useful methods in 2D
|
|
|
@765
|
6 years |
Maciej Komosinski |
Wider ranges of allowed values for mutation when only partial …
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|
|
@764
|
6 years |
Maciej Komosinski |
Less deterministic (less absorbing) mutation for very narrow allowed …
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|
|
@763
|
6 years |
Maciej Komosinski |
Higher precision when storing variable values
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|
|
@762
|
6 years |
Maciej Komosinski |
Default sample values for a 2D problem, not 1D; added documentation …
|
|
|
@761
|
6 years |
Maciej Komosinski |
Introduced a macro for the number of times GenMan? tries to repeat a …
|
|
|
@760
|
6 years |
Maciej Komosinski |
- added support for new API for neuron types and their properties
- …
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|
|
@759
|
6 years |
Maciej Komosinski |
f1 and f4 stick properties unified and moved to a separate structure …
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|
|
@758
|
6 years |
Maciej Komosinski |
Added a few useful functions providing lists of neurons with specific …
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|
|
@757
|
6 years |
Maciej Komosinski |
Removed appending the original fn genotype as a comment in the …
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|
|
@756
|
6 years |
Maciej Komosinski |
Added frams/genetics/fn to ALL_DIRS so make clean cleans all dirs
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|
|
@755
|
6 years |
Maciej Komosinski |
Renamed ParamTree::Node -> ParamTree::ParamTreeNode? to avoid name …
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|
|
@754
|
7 years |
Maciej Komosinski |
More strict rules for Param type descriptions and "unlimited range …
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|
|
@753
|
7 years |
Maciej Komosinski |
Improved Vector and Dictionary deserialization: any number of spaces …
|
|
|
@752
|
7 years |
Maciej Komosinski |
Mutation in the 'fn' encoding respects custom min,max,stddev for each …
|
|
|
@751
|
7 years |
Maciej Komosinski |
More versatile mutation function for numbers
|
|
|
@750
|
7 years |
Maciej Komosinski |
More proper definition of the crossover parameter
|
|
|
@749
|
7 years |
Maciej Komosinski |
Added a new function to linearly mix two vectors of real numbers
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|
|
@748
|
7 years |
Maciej Komosinski |
Configured and activated the new "fn" genetic representation
|
|
|
@747
|
7 years |
Maciej Komosinski |
Added a new "fn" genetic representation (a vector of real numbers for …
|
|
|
@746
|
7 years |
Maciej Komosinski |
Code formatting
|
|
|
@745
|
7 years |
Maciej Komosinski |
Renamed ParamInterface::save() -> saveMultiLine()
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|
|
@744
|
7 years |
Maciej Komosinski |
ParamTree? constructor changed (to make it easier for javascript) to …
|
|
|
@743
|
7 years |
Maciej Komosinski |
Introduced different function names in C++ instead of overloading …
|
|
|
@742
|
7 years |
Maciej Komosinski |
Code formatting
|
|
|
@741
|
7 years |
Maciej Komosinski |
Added just for inspiration/as an example of implementation; now these …
|
|
|
@740
|
7 years |
Maciej Komosinski |
Added support for developmental phases ("checkpoints") to converters …
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|
|
@739
|
7 years |
Maciej Komosinski |
Unlimited number of model Parts/Joints/Neurons? when displaying the …
|
|
|
@738
|
7 years |
Maciej Komosinski |
Fixed comment location in source
|
|
|
@737
|
7 years |
Maciej Komosinski |
Made destructors virtual to avoid compiler warnings
|
|
|
@736
|
7 years |
Maciej Komosinski |
Added the new "using_checkpoints" argument to genetic converters so …
|
|
|
@735
|
7 years |
Maciej Komosinski |
Base genotype converter is now abstract, which triggers compilation …
|
|
|
@734
|
7 years |
Maciej Komosinski |
SString -> std::string
|
|
|
@733
|
7 years |
Maciej Komosinski |
Code formatting
|
|
|
@732
|
7 years |
Maciej Komosinski |
Added support for "checkpoints" (intermediate phases of development of …
|
|
|
@731
|
7 years |
Maciej Komosinski |
Code formatting
|
|
|
@730
|
7 years |
Maciej Komosinski |
Added/updated comments
|
|
|
@729
|
7 years |
Maciej Komosinski |
mutableparam_test added: demonstrates usage of ParamTransaction? and …
|
|
|
@728
|
7 years |
Maciej Komosinski |
Cosmetic
|
|
|
@727
|
7 years |
Maciej Komosinski |
The sample 'y' format converter returns f0 genotype now instead of …
|
|
|
@726
|
7 years |
Maciej Komosinski |
- Changed Model::singleStepBuild() to Model::addFromString() to create …
|
|
|
@725
|
7 years |
Maciej Komosinski |
Fix crash when no data provided
|
|
|
@724
|
7 years |
Maciej Komosinski |
Two sample programs demonstrating usage of param tree
|
|
|
@723
|
7 years |
Maciej Komosinski |
Building parameter tree based on names of parameter groups defined in …
|
|
|
@722
|
7 years |
Maciej Komosinski |
Added source for Model VM object
|
|
|
@721
|
7 years |
Maciej Komosinski |
Code formatting
|
|
|
@720
|
7 years |
Maciej Komosinski |
Param::save2() renamed to saveSingleLine(); unified Param::load() so …
|
|
|
@719
|
7 years |
Maciej Komosinski |
f1->f0 mapping maps ',' and ')' symbols to the branching Part (earlier …
|
|
|
@718
|
7 years |
Maciej Komosinski |
Fixed order of constructor calls
|
|
|
@717
|
7 years |
sz |
Framsticks 5.0rc12 update
|
|
|
@716
|
7 years |
Maciej Komosinski |
The f1 converter is now able to map more than one genotype character …
|
|
|
@715
|
7 years |
Maciej Komosinski |
GenMan?'s constructor now calls its setDefaults() to initialize all …
|
|
|
@714
|
7 years |
Maciej Komosinski |
- Setting default NeuroClass? active/genactive in preconfigured …
|
|
|
@713
|
7 years |
Maciej Komosinski |
Made error message more specific
|
|
|
@712
|
7 years |
Maciej Komosinski |
Improved status and error messages
|
|
|
@711
|
7 years |
konrad |
Logs without [BORN] entries (only [OFFSPRING]) should load properly now
|
|
|
@710
|
7 years |
konrad |
Added multi-input-file support (eg. ./tree-genealogy.py -i file1.out …
|
|
|
@709
|
7 years |
konrad |
tree-genealogy.py should now work correctly with the order of events …
|
|
|
@708
|
7 years |
Maciej Komosinski |
Improved diagnostic message
|
|
|
@707
|
7 years |
konrad |
Added a warning message about merging nodes with a virtual parent node.
|
|
|
@706
|
7 years |
konrad |
No more svn ignore on mds-and-trees
|
|
|
@705
|
7 years |
konrad |
Added an example of configuration file with colormaps
|
|
|
@704
|
7 years |
Maciej Komosinski |
ParamInterface::getText() improved: removed pointless iteration when …
|
|
|
@703
|
7 years |
Maciej Komosinski |
The "ex" macro renamed to "expdef" since 5.0rc12
|
|
|
@702
|
7 years |
konrad |
Non-normalized step values for cmap can now extend outside the range …
|
|
|
@701
|
7 years |
konrad |
Fixed a bug that could occur for trees with a lot of crossover …
|
|
|
@700
|
7 years |
konrad |
Colors support matplotlib cmaps now. 'color' property in config file …
|
|
|
@699
|
7 years |
sz |
updated for the Framsticks release v5.0rc11 (mostly documentation …
|
|
|
@698
|
7 years |
Maciej Komosinski |
Explicit cast to signed integer before applying negation, this is a …
|
|
|
@697
|
7 years |
Maciej Komosinski |
More legible and consistent notation of ranges
|
|
|
@696
|
7 years |
konrad |
Changes to formating of min/max values of properties
|
|
|
@695
|
7 years |
konrad |
Using matplotlib's color package to interpret colors. Color can be now …
|
|
|
@694
|
7 years |
konrad |
Some improvements in behavior for big trees
|
|
|
@693
|
7 years |
sz |
Updated for the most recent Framsticks release v5.0rc10
|
|
|
@692
|
7 years |
Maciej Komosinski |
Updated version IDs
|
|
|
@691
|
7 years |
Maciej Komosinski |
Support for reading/parsing and writing 64-bit integer values
|
|
|
@690
|
7 years |
konrad |
Better (but not ideal) behavior for very big trees
|
|
|
@689
|
7 years |
Maciej Komosinski |
More informative message
|
|
|
@688
|
7 years |
Maciej Komosinski |
More informative message
|
|
|
@687
|
7 years |
konrad |
Using "inherited' to decide horizontal distance from the parent
|
|
|
@686
|
7 years |
Maciej Komosinski |
Made loop iteration variable implicit ("enumerate")
|
|
|
@685
|
7 years |
Maciej Komosinski |
Displays progress as convenient percentage
|
|
|
@684
|
7 years |
Maciej Komosinski |
Minor optimization
|
|
|
@683
|
7 years |
Maciej Komosinski |
Slightly more helpful error message
|
|
|
@682
|
7 years |
konrad |
Broken last lines in input logs will not crash the script anymore (the …
|
|
|
@681
|
7 years |
konrad |
Improved the compute_depth function so now it works much faster for …
|
|
|
@680
|
7 years |
konrad |
Fixed the "ValueError?: max() arg is an empty sequence" error occurring …
|
|
|
@679
|
7 years |
konrad |
compute_adepth no longer uses recursion (so it should work better …
|
|
|
@678
|
7 years |
konrad |
Fixed a bug attempting to normalize a list of lists
|
|
|
@677
|
7 years |
konrad |
Fixed a bug with an incorrect order of assigning placement to nodes
|
|
|
@676
|
7 years |
Maciej Komosinski |
Improved comments, removed unnecessary TODO regarding "Rr" modifiers
|
|
|
@675
|
7 years |
Maciej Komosinski |
Code formatting
|
|
|
@674
|
7 years |
Maciej Komosinski |
f4 modifiers implemented similarly to f1 modifiers, and a base for …
|
|
|
@673
|
7 years |
Maciej Komosinski |
Added three functions that may be useful in general
|
|
|
@672
|
7 years |
Maciej Komosinski |
More appropriate name for the "model_energy_max" variable
|
|
|
@671
|
7 years |
Maciej Komosinski |
Unified property names of f1 and f4; improved docs; 3.141 -> M_PI
|
|
|
@670
|
7 years |
Maciej Komosinski |
Improved variable names and docs
|
|
|
@669
|
7 years |
Maciej Komosinski |
As default foraminifera initial chamber radius in Framsticks units …
|
|
|
@668
|
7 years |
Maciej Komosinski |
Fixed argument type in GenMan?.getSimplest()
|
|
|