|
|
@733
|
7 years |
Maciej Komosinski |
Code formatting
|
|
|
@732
|
7 years |
Maciej Komosinski |
Added support for "checkpoints" (intermediate phases of development of …
|
|
|
@731
|
7 years |
Maciej Komosinski |
Code formatting
|
|
|
@730
|
7 years |
Maciej Komosinski |
Added/updated comments
|
|
|
@729
|
7 years |
Maciej Komosinski |
mutableparam_test added: demonstrates usage of ParamTransaction? and …
|
|
|
@728
|
7 years |
Maciej Komosinski |
Cosmetic
|
|
|
@727
|
7 years |
Maciej Komosinski |
The sample 'y' format converter returns f0 genotype now instead of …
|
|
|
@726
|
7 years |
Maciej Komosinski |
- Changed Model::singleStepBuild() to Model::addFromString() to create …
|
|
|
@725
|
7 years |
Maciej Komosinski |
Fix crash when no data provided
|
|
|
@724
|
7 years |
Maciej Komosinski |
Two sample programs demonstrating usage of param tree
|
|
|
@723
|
7 years |
Maciej Komosinski |
Building parameter tree based on names of parameter groups defined in …
|
|
|
@722
|
7 years |
Maciej Komosinski |
Added source for Model VM object
|
|
|
@721
|
7 years |
Maciej Komosinski |
Code formatting
|
|
|
@720
|
7 years |
Maciej Komosinski |
Param::save2() renamed to saveSingleLine(); unified Param::load() so …
|
|
|
@719
|
7 years |
Maciej Komosinski |
f1->f0 mapping maps ',' and ')' symbols to the branching Part (earlier …
|
|
|
@718
|
7 years |
Maciej Komosinski |
Fixed order of constructor calls
|
|
|
@717
|
7 years |
sz |
Framsticks 5.0rc12 update
|
|
|
@716
|
7 years |
Maciej Komosinski |
The f1 converter is now able to map more than one genotype character …
|
|
|
@715
|
7 years |
Maciej Komosinski |
GenMan?'s constructor now calls its setDefaults() to initialize all …
|
|
|
@714
|
7 years |
Maciej Komosinski |
- Setting default NeuroClass? active/genactive in preconfigured …
|
|
|
@713
|
7 years |
Maciej Komosinski |
Made error message more specific
|
|
|
@712
|
7 years |
Maciej Komosinski |
Improved status and error messages
|
|
|
@711
|
7 years |
konrad |
Logs without [BORN] entries (only [OFFSPRING]) should load properly now
|
|
|
@710
|
7 years |
konrad |
Added multi-input-file support (eg. ./tree-genealogy.py -i file1.out …
|
|
|
@709
|
7 years |
konrad |
tree-genealogy.py should now work correctly with the order of events …
|
|
|
@708
|
7 years |
Maciej Komosinski |
Improved diagnostic message
|
|
|
@707
|
7 years |
konrad |
Added a warning message about merging nodes with a virtual parent node.
|
|
|
@706
|
7 years |
konrad |
No more svn ignore on mds-and-trees
|
|
|
@705
|
7 years |
konrad |
Added an example of configuration file with colormaps
|
|
|
@704
|
7 years |
Maciej Komosinski |
ParamInterface::getText() improved: removed pointless iteration when …
|
|
|
@703
|
7 years |
Maciej Komosinski |
The "ex" macro renamed to "expdef" since 5.0rc12
|
|
|
@702
|
7 years |
konrad |
Non-normalized step values for cmap can now extend outside the range …
|
|
|
@701
|
7 years |
konrad |
Fixed a bug that could occur for trees with a lot of crossover …
|
|
|
@700
|
7 years |
konrad |
Colors support matplotlib cmaps now. 'color' property in config file …
|
|
|
@699
|
7 years |
sz |
updated for the Framsticks release v5.0rc11 (mostly documentation …
|
|
|
@698
|
7 years |
Maciej Komosinski |
Explicit cast to signed integer before applying negation, this is a …
|
|
|
@697
|
7 years |
Maciej Komosinski |
More legible and consistent notation of ranges
|
|
|
@696
|
7 years |
konrad |
Changes to formating of min/max values of properties
|
|
|
@695
|
7 years |
konrad |
Using matplotlib's color package to interpret colors. Color can be now …
|
|
|
@694
|
7 years |
konrad |
Some improvements in behavior for big trees
|
|
|
@693
|
7 years |
sz |
Updated for the most recent Framsticks release v5.0rc10
|
|
|
@692
|
7 years |
Maciej Komosinski |
Updated version IDs
|
|
|
@691
|
7 years |
Maciej Komosinski |
Support for reading/parsing and writing 64-bit integer values
|
|
|
@690
|
7 years |
konrad |
Better (but not ideal) behavior for very big trees
|
|
|
@689
|
7 years |
Maciej Komosinski |
More informative message
|
|
|
@688
|
7 years |
Maciej Komosinski |
More informative message
|
|
|
@687
|
7 years |
konrad |
Using "inherited' to decide horizontal distance from the parent
|
|
|
@686
|
7 years |
Maciej Komosinski |
Made loop iteration variable implicit ("enumerate")
|
|
|
@685
|
7 years |
Maciej Komosinski |
Displays progress as convenient percentage
|
|
|
@684
|
7 years |
Maciej Komosinski |
Minor optimization
|
|
|
@683
|
7 years |
Maciej Komosinski |
Slightly more helpful error message
|
|
|
@682
|
7 years |
konrad |
Broken last lines in input logs will not crash the script anymore (the …
|
|
|
@681
|
7 years |
konrad |
Improved the compute_depth function so now it works much faster for …
|
|
|
@680
|
7 years |
konrad |
Fixed the "ValueError?: max() arg is an empty sequence" error occurring …
|
|
|
@679
|
7 years |
konrad |
compute_adepth no longer uses recursion (so it should work better …
|
|
|
@678
|
7 years |
konrad |
Fixed a bug attempting to normalize a list of lists
|
|
|
@677
|
7 years |
konrad |
Fixed a bug with an incorrect order of assigning placement to nodes
|
|
|
@676
|
7 years |
Maciej Komosinski |
Improved comments, removed unnecessary TODO regarding "Rr" modifiers
|
|
|
@675
|
7 years |
Maciej Komosinski |
Code formatting
|
|
|
@674
|
7 years |
Maciej Komosinski |
f4 modifiers implemented similarly to f1 modifiers, and a base for …
|
|
|
@673
|
7 years |
Maciej Komosinski |
Added three functions that may be useful in general
|
|
|
@672
|
7 years |
Maciej Komosinski |
More appropriate name for the "model_energy_max" variable
|
|
|
@671
|
7 years |
Maciej Komosinski |
Unified property names of f1 and f4; improved docs; 3.141 -> M_PI
|
|
|
@670
|
7 years |
Maciej Komosinski |
Improved variable names and docs
|
|
|
@669
|
7 years |
Maciej Komosinski |
As default foraminifera initial chamber radius in Framsticks units …
|
|
|
@668
|
7 years |
Maciej Komosinski |
Fixed argument type in GenMan?.getSimplest()
|
|
|
@667
|
7 years |
Maciej Komosinski |
- fF foraminifera encoding supports scaling (radius) of the initial …
|
|
|
@666
|
7 years |
Maciej Komosinski |
Added missing #include
|
|
|
@665
|
7 years |
Maciej Komosinski |
Cosmetic
|
|
|
@664
|
7 years |
Maciej Komosinski |
Mark last Part white - a visual aid for easier editing of f9 genotypes
|
|
|
@663
|
7 years |
sz |
Updated for the upcoming Framsticks v5.0rc9
|
|
|
@662
|
7 years |
Maciej Komosinski |
- Ensure solid shapes (SolidsShapeTypeModel?) are used in geometry …
|
|
|
@661
|
7 years |
Maciej Komosinski |
FramScript?'s ModelGeometr? converts and caches the input model so …
|
|
|
@660
|
7 years |
Maciej Komosinski |
Model shape conversion no longer requires const Model&
|
|
|
@659
|
7 years |
Maciej Komosinski |
Detecting more unwanted flags in Param sanity check
|
|
|
@658
|
7 years |
Maciej Komosinski |
- One function name made shorter
- Fixed some typos
- Predictable …
|
|
|
@657
|
7 years |
Maciej Komosinski |
A comment on potential optimization in ModelGeometryInfo?
|
|
|
@656
|
7 years |
Maciej Komosinski |
Removed useless READONLY flag in functions
|
|
|
@655
|
7 years |
Maciej Komosinski |
Better description of the VIRTFILE_OVERLOADING macro
|
|
|
@654
|
7 years |
Maciej Komosinski |
More strict checking for improper flag/type combinations
|
|
|
@653
|
7 years |
Maciej Komosinski |
Model::buildUsingSolidShapeTypes() can now handle single-Part models …
|
|
|
@652
|
8 years |
Maciej Komosinski |
Cosmetic
|
|
|
@651
|
8 years |
Maciej Komosinski |
0,1 -> false,true
|
|
|
@650
|
8 years |
Maciej Komosinski |
Warn when missing closing tilde (~) and code formatting
|
|
|
@649
|
8 years |
Maciej Komosinski |
Display diagnostic message when threads not released properly
|
|
|
@648
|
8 years |
Maciej Komosinski |
Warn when trying to remove non-existing indexed object
|
|
|
@647
|
8 years |
Maciej Komosinski |
Updated URLs, removed non-ascii characters
|
|
|
@646
|
8 years |
Maciej Komosinski |
Support for multiple coexisting implementations of the same neuron …
|
|
|
@645
|
8 years |
Maciej Komosinski |
f0 is strict now, will not accept float when int is expected
|
|
|
@644
|
8 years |
Maciej Komosinski |
Invalid references from neurons to Parts/Joints? are now reported
|
|
|
@643
|
8 years |
Maciej Komosinski |
The meaning of f9 3D-direction genes made consistent with Framsticks …
|
|
|
@642
|
8 years |
Maciej Komosinski |
Implemented insert() in FramScript? Vector class
|
|
|
@641
|
8 years |
sz |
Updated for Framsticks version 5.0rc8
|
|
|
@640
|
8 years |
Maciej Komosinski |
Introduced a separate function to provide a human-friendly description …
|
|
|
@639
|
8 years |
Maciej Komosinski |
Introduced separate functions for formatting time.
|
|
|
@638
|
8 years |
sz |
script updated (moveAbs, size_, pos_, center_)
|
|
|
@637
|
8 years |
Maciej Komosinski |
Extended code so that NeuroClass? properties are described in more detail
|
|
|
@636
|
8 years |
Maciej Komosinski |
Modulo by zero is safe just as division by zero and prints analogous …
|
|
|
@635
|
8 years |
Maciej Komosinski |
Introduced specialized info_* fields in (Mini)Genotype that match FEC …
|
|
|
@634
|
8 years |
sz |
Updated for the upcoming Framsticks release - the old Shapes object is …
|
|
|