Ignore:
Timestamp:
12/10/20 22:33:22 (3 months ago)
Author:
oriona
Message:

Similarity measures code refactored. Distribution-based similarity measure added.

File:
1 edited

Legend:

Unmodified
Added
Removed
  • cpp/frams/Makefile-SDK-files

    r1035 r1044  
    22
    33# ALL_DIRS is later expanded by the shell, no spaces/newlines allowed, or it breaks
    4 ALL_DIRS={common,PrintFloat,frams,frams/canvas,frams/config,common/loggers,frams/genetics,frams/genetics/f0,frams/genetics/f1,frams/genetics/f2,frams/genetics/f3,frams/genetics/f4,frams/genetics/f5,frams/genetics/f6,frams/genetics/f7,frams/genetics/f8,frams/genetics/f9,frams/genetics/fn,frams/genetics/fF,frams/genetics/fT,frams/genetics/fB,frams/genetics/fH,frams/genetics/fL,frams/genetics/fS,frams/model,frams/neuro,frams/neuro/impl,frams/param,frams/test,frams/util,frams/vm/classes,common/virtfile,frams/_demos,frams/model/geometry,frams/_demos/geometry,frams/model/similarity,frams/model/similarity/hungarian,frams/model/similarity/SVD}
     4ALL_DIRS={common,PrintFloat,frams,frams/canvas,frams/config,common/loggers,frams/genetics,frams/genetics/f0,frams/genetics/f1,frams/genetics/f2,frams/genetics/f3,frams/genetics/f4,frams/genetics/f5,frams/genetics/f6,frams/genetics/f7,frams/genetics/f8,frams/genetics/f9,frams/genetics/fn,frams/genetics/fF,frams/genetics/fT,frams/genetics/fB,frams/genetics/fH,frams/genetics/fL,frams/genetics/fS,frams/model,frams/neuro,frams/neuro/impl,frams/param,frams/test,frams/util,frams/vm/classes,common/virtfile,frams/_demos,frams/model/geometry,frams/_demos/geometry,frams/model/similarity,frams/model/similarity/hungarian,frams/model/similarity/SVD,frams/model/similarity/EMD}
    55
    66GEOMETRY_OBJS=frams/model/geometry/meshbuilder.o frams/model/geometry/modelgeometryinfo.o frams/model/geometry/geometryutils.o
     
    3737NEURO_OBJS=frams/neuro/neuroimpl.o frams/neuro/neurofactory.o frams/neuro/impl/neuroimpl-simple.o frams/neuro/impl/neuroimpl-channels.o frams/neuro/impl/neuroimpl-fuzzy.o frams/neuro/impl/neuroimpl-fuzzy-f0.o
    3838
    39 SIMILARITY_OBJS=frams/model/similarity/hungarian/hungarian.o frams/model/similarity/SVD/lapack.o frams/model/similarity/SVD/matrix_tools.o frams/model/similarity/simil_match.o frams/model/similarity/simil_model.o
     39SIMILARITY_OBJS=frams/_demos/geometry/geometrytestutils.o frams/model/similarity/measure-greedy.o frams/model/similarity/measure-hungarian.o frams/model/similarity/measure-distribution.o frams/model/similarity/measure-mds-based.o frams/model/similarity/simil-measure.o frams/model/similarity/hungarian/hungarian.o frams/model/similarity/SVD/lapack.o frams/model/similarity/SVD/matrix_tools.o frams/model/similarity/simil-match.o
    4040
    4141NN_LAYOUT_OBJS=frams/canvas/nn_layout_model.o frams/canvas/nn_simple_layout.o frams/canvas/nn_smart_layout.o
     
    9696SIMIL_TEST_OBJS=frams/_demos/simil_test.o $(SIMILARITY_OBJS) frams/_demos/genotypeloader.o frams/_demos/genotypemini.o frams/param/multiparamload.o common/virtfile/stdiofile.o $(STDOUT_LOGGER_OBJS) $(SDK_OBJS) $(GENOCONV_AND_GENMAN_SDK_OBJS)
    9797
    98 SIMIL_UNITTESTS_OBJS=frams/_demos/simil_unittests.o frams/model/similarity/simil_match.o
     98SIMIL_UNITTESTS_OBJS=frams/_demos/simil_unittests.o frams/model/similarity/simil-match.o
    9999
    100100PARAMTREE_STDIN_TEST_OBJS=frams/_demos/paramtree_stdin_test.o frams/_demos/paramtree_print.o $(STDOUT_LOGGER_OBJS) common/virtfile/stdiofile.o $(SDK_OBJS) frams/param/paramtree.o
    101101
    102 PARAMTREE_PARAMLIST_TEST_OBJS=$(sort frams/_demos/paramtree_paramlist_test.o frams/_demos/paramtree_print.o $(STDOUT_LOGGER_OBJS) common/virtfile/stdiofile.o $(SDK_OBJS) $(GENOCONV_AND_GENMAN_SDK_OBJS) frams/neuro/neuroimpl.o frams/neuro/neurofactory.o frams/neuro/impl/neuroimpl-simple.o frams/neuro/impl/neuroimpl-channels.o frams/neuro/impl/neuroimpl-fuzzy.o frams/neuro/impl/neuroimpl-fuzzy-f0.o $(GENOTYPE_LOADER_OBJS) $(GEOMETRY_OBJS) frams/model/geometry/modelgeoclass.o frams/model/modelobj.o frams/param/paramtree.o)
     102PARAMTREE_PARAMLIST_TEST_OBJS=$(sort frams/_demos/paramtree_paramlist_test.o frams/_demos/paramtree_print.o $(STDOUT_LOGGER_OBJS) common/virtfile/stdiofile.o $(SDK_OBJS) $(GENOCONV_AND_GENMAN_SDK_OBJS) frams/neuro/neuroimpl.o frams/neuro/neurofactory.o frams/neuro/impl/neuroimpl-simple.o frams/neuro/impl/neuroimpl-channels.o frams/neuro/impl/neuroimpl-fuzzy.o frams/neuro/impl/neuroimpl-fuzzy-f0.o $(GENOTYPE_LOADER_OBJS) $(GEOMETRY_OBJS) $(SIMILARITY_OBJS) frams/model/geometry/modelgeoclass.o frams/model/modelobj.o frams/param/paramtree.o)
    103103
    104104MUTABLEPARAM_TEST_OBJS=frams/_demos/mutableparam_test.o $(STDOUT_LOGGER_OBJS) common/virtfile/stdiofile.o $(SDK_OBJS) frams/param/mutableparam.o frams/param/mutparamlist.o frams/param/paramtrans.o
Note: See TracChangeset for help on using the changeset viewer.